############################################################################# ### BORN ION SOLVATION ENERGY ### $Id$ ### ### Please see APBS documentation (http://apbs.sourceforge.net/doc/) for ### input file sytax. ############################################################################# # READ IN MOLECULES read mol pqr ion.pqr end # COMPUTE POTENTIAL FOR SOLVATED STATE elec name solvated mg-auto dime 65 65 65 cglen 50 50 50 fglen 12 12 12 fgcent mol 1 cgcent mol 1 mol 1 lpbe bcfl mdh pdie 1.0 sdie 78.54 chgm spl2 srfm mol srad 1.4 swin 0.3 sdens 10.0 temp 298.15 calcenergy total calcforce no write pot dx potential # write charge dx charge end quit